last update: 2023-10-24

Cnidaria

Anthozoa

Hexacorallia

Acropora

Acropora acuminata

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora awi

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora cervicornis

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Libro S, Kaluziak ST, Vollmer SV (2013) RNA-seq Profiles of Immune Related Genes in the Staghorn Coral Acropora cervicornis Infected with White Band Disease. PLoS ONE 8(11): e81821. https://doi.org/10.1371/journal.pone.0081821	10.1371/journal.pone.0081821	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Libro S, Kaluziak ST, Vollmer SV (2013) RNA-seq Profiles of Immune Related Genes in the Staghorn Coral Acropora cervicornis Infected with White Band Disease. PLoS ONE 8(11): e81821. https://doi.org/10.1371/journal.pone.0081821	10.1371/journal.pone.0081821	nan

Acropora cytherea

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora digitifera

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora echinata

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora florida

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora gemmifera

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora hyacinthus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Acropora intermedia

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora microphthalma

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora millepora

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Fuller, Zachary L.; Mocellin, Veronique J. L.; Morris, Luke A.; Cantin, Neal; Shepherd, Jihanne; Sarre, Luke et al. (2020): Population genetics of the coral Acropora millepora: Toward genomic prediction of bleaching. In Science 369 (6501), eaba4674. DOI: 10.1126/science.aba4674.	10.1126/science.aba4674	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	MOYA, A., HUISMAN, L., BALL, E.E., HAYWARD, D.C., GRASSO, L.C., CHUA, C.M., WOO, H.N., GATTUSO, J.-P., FORÊT, S. and MILLER, D.J. (2012), Whole Transcriptome Analysis of the Coral Acropora millepora Reveals Complex Responses to CO2-driven Acidification during the Initiation of Calcification. Molecular Ecology, 21: 2440-2454. https://doi.org/10.1111/j.1365-294X.2012.05554.x	10.1111/j.1365-294X.2012.05554.x	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	MOYA, A., HUISMAN, L., BALL, E.E., HAYWARD, D.C., GRASSO, L.C., CHUA, C.M., WOO, H.N., GATTUSO, J.-P., FORÊT, S. and MILLER, D.J. (2012), Whole Transcriptome Analysis of the Coral Acropora millepora Reveals Complex Responses to CO2-driven Acidification during the Initiation of Calcification. Molecular Ecology, 21: 2440-2454. https://doi.org/10.1111/j.1365-294X.2012.05554.x	10.1111/j.1365-294X.2012.05554.x	nan

Acropora muricata

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Han T, Liao X, Zhu Y, Liu Y, Lu N, Li Y, Guo Z, Chen JY, He C, Lu Z. Full-Length Transcriptome Maps of Reef-Building Coral Illuminate the Molecular Basis of Calcification, Symbiosis, and Circadian Genes. Int J Mol Sci. 2022 Sep 22;23(19):11135. doi: 10.3390/ijms231911135. PMID: 36232445; PMCID: PMC9570262.	10.3390/ijms231911135	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Han T, Liao X, Zhu Y, Liu Y, Lu N, Li Y, Guo Z, Chen JY, He C, Lu Z. Full-Length Transcriptome Maps of Reef-Building Coral Illuminate the Molecular Basis of Calcification, Symbiosis, and Circadian Genes. Int J Mol Sci. 2022 Sep 22;23(19):11135. doi: 10.3390/ijms231911135. PMID: 36232445; PMCID: PMC9570262.	10.3390/ijms231911135	nan

Acropora nasuta

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora selago

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora tenuis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan
Link to Dataset	nan	nan	nan	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Acropora yongei

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Khalturin K, Inoue J, Zayasu Y, Kanda M, Kawamitsu M, Yoshioka Y, Yamashita H, Suzuki G, Satoh N. Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes. Molecular Biology and Evolution (2020) Doi: 10.1093/molbev/msaa216	10.1093/molbev/msaa216	nan

Anthopleura

Anthopleura elegantissima

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Kitchen SA, Crowder CM, Poole AZ, Weis VM, Meyer E. De Novo Assembly and Characterization of Four Anthozoan (Phylum Cnidaria) Transcriptomes. G3 (Bethesda). 2015 Sep 17;5(11):2441-52. doi: 10.1534/g3.115.020164. PMID: 26384772; PMCID: PMC4632063.	10.1534/g3.115.020164	nan

Antipathozoanthus

Antipathozoanthus obscurus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Antipathozoanthus remengesaui

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Astreopora

Astreopora myriophthalma

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Yoshioka Y, Suzuki G, Zayasu Y, Yamashita H, Shinzato C. Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora. BMC Ecol Evol. 2022 May 27;22(1):71. doi: 10.1186/s12862-022-02023-8. PMID: 35624412; PMCID: PMC9145168.	10.1186/s12862-022-02023-8	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Yoshioka Y, Suzuki G, Zayasu Y, Yamashita H, Shinzato C. Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora. BMC Ecol Evol. 2022 May 27;22(1):71. doi: 10.1186/s12862-022-02023-8. PMID: 35624412; PMCID: PMC9145168.	10.1186/s12862-022-02023-8	nan

Bergia

Bergia sp.catenularis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Churabana

Churabana kuroshioae

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Entacmaea

Entacmaea quadricolor

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Epizoanthus

Epizoanthus fatuus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Epizoanthus planus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Epizoanthus rinbou

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Epizoanthus scotinus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Epizoanthus stellaris

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Fungia

Fungia scutaria

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Kitchen SA, Crowder CM, Poole AZ, Weis VM, Meyer E. De Novo Assembly and Characterization of Four Anthozoan (Phylum Cnidaria) Transcriptomes. G3 (Bethesda). 2015 Sep 17;5(11):2441-52. doi: 10.1534/g3.115.020164. PMID: 26384772; PMCID: PMC4632063.	10.1534/g3.115.020164	nan

Heteractis

Heteractis crispa

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Heteractis magnifica

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Hydrozoanthus

Hydrozoanthus gracilis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Isaurus

Isaurus tuberculatus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Montastraea

Montastraea cavernosa

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Kitchen SA, Crowder CM, Poole AZ, Weis VM, Meyer E. De Novo Assembly and Characterization of Four Anthozoan (Phylum Cnidaria) Transcriptomes. G3 (Bethesda). 2015 Sep 17;5(11):2441-52. doi: 10.1534/g3.115.020164. PMID: 26384772; PMCID: PMC4632063.	10.1534/g3.115.020164	nan

Montipora

Montipora aequituberculata

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Montipora cactus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Yoshioka Y, Suzuki G, Zayasu Y, Yamashita H, Shinzato C. Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora. BMC Ecol Evol. 2022 May 27;22(1):71. doi: 10.1186/s12862-022-02023-8. PMID: 35624412; PMCID: PMC9145168.	10.1186/s12862-022-02023-8	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Yoshioka Y, Suzuki G, Zayasu Y, Yamashita H, Shinzato C. Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora. BMC Ecol Evol. 2022 May 27;22(1):71. doi: 10.1186/s12862-022-02023-8. PMID: 35624412; PMCID: PMC9145168.	10.1186/s12862-022-02023-8	nan

Montipora capitata

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Montipora efflorescens

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Yoshioka Y, Suzuki G, Zayasu Y, Yamashita H, Shinzato C. Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora. BMC Ecol Evol. 2022 May 27;22(1):71. doi: 10.1186/s12862-022-02023-8. PMID: 35624412; PMCID: PMC9145168.	10.1186/s12862-022-02023-8	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Yoshioka Y, Suzuki G, Zayasu Y, Yamashita H, Shinzato C. Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora. BMC Ecol Evol. 2022 May 27;22(1):71. doi: 10.1186/s12862-022-02023-8. PMID: 35624412; PMCID: PMC9145168.	10.1186/s12862-022-02023-8	nan

Montipora foliosa

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Han T, Liao X, Zhu Y, Liu Y, Lu N, Li Y, Guo Z, Chen JY, He C, Lu Z. Full-Length Transcriptome Maps of Reef-Building Coral Illuminate the Molecular Basis of Calcification, Symbiosis, and Circadian Genes. Int J Mol Sci. 2022 Sep 22;23(19):11135. doi: 10.3390/ijms231911135. PMID: 36232445; PMCID: PMC9570262.	10.3390/ijms231911135	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Han T, Liao X, Zhu Y, Liu Y, Lu N, Li Y, Guo Z, Chen JY, He C, Lu Z. Full-Length Transcriptome Maps of Reef-Building Coral Illuminate the Molecular Basis of Calcification, Symbiosis, and Circadian Genes. Int J Mol Sci. 2022 Sep 22;23(19):11135. doi: 10.3390/ijms231911135. PMID: 36232445; PMCID: PMC9570262.	10.3390/ijms231911135	nan

Nematostella

Nematostella vectensis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Neozoanthus

Neozoanthus uchina

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan
Link to Dataset	nan	nan	nan	nan

Orbicella

Orbicella faveolata

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

SRA Library

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Prada C. , B. Hanna, A. F. Budd, C. M. Woodley, J. Schmutz, J. Grimwood, R. Iglesias-Prieto, J. M. Pandolfi, D. Levitan, K. G. Johnson, N. Knowlton, H. Kitano, M. DeGiorgio, M. Medina, Current biology : CB 2016, 26, 3190–3194.	10.1016/j.cub.2016.09.039.	nan

Palythoa

Palythoa grandis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Palythoa heliodiscus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Parazoanthus

Parazoanthus atlanticus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Parazoanthus darwini

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Parazoanthus swiftii

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Phymanthus

Phymanthus crucifer

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Pocillopora

Pocillopora damicornis

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Han T, Liao X, Zhu Y, Liu Y, Lu N, Li Y, Guo Z, Chen JY, He C, Lu Z. Full-Length Transcriptome Maps of Reef-Building Coral Illuminate the Molecular Basis of Calcification, Symbiosis, and Circadian Genes. Int J Mol Sci. 2022 Sep 22;23(19):11135. doi: 10.3390/ijms231911135. PMID: 36232445; PMCID: PMC9570262.	10.3390/ijms231911135	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Han T, Liao X, Zhu Y, Liu Y, Lu N, Li Y, Guo Z, Chen JY, He C, Lu Z. Full-Length Transcriptome Maps of Reef-Building Coral Illuminate the Molecular Basis of Calcification, Symbiosis, and Circadian Genes. Int J Mol Sci. 2022 Sep 22;23(19):11135. doi: 10.3390/ijms231911135. PMID: 36232445; PMCID: PMC9570262.	10.3390/ijms231911135	nan

Pocillopora verrucosa

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Han T, Liao X, Zhu Y, Liu Y, Lu N, Li Y, Guo Z, Chen JY, He C, Lu Z. Full-Length Transcriptome Maps of Reef-Building Coral Illuminate the Molecular Basis of Calcification, Symbiosis, and Circadian Genes. Int J Mol Sci. 2022 Sep 22;23(19):11135. doi: 10.3390/ijms231911135. PMID: 36232445; PMCID: PMC9570262.	10.3390/ijms231911135	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Han T, Liao X, Zhu Y, Liu Y, Lu N, Li Y, Guo Z, Chen JY, He C, Lu Z. Full-Length Transcriptome Maps of Reef-Building Coral Illuminate the Molecular Basis of Calcification, Symbiosis, and Circadian Genes. Int J Mol Sci. 2022 Sep 22;23(19):11135. doi: 10.3390/ijms231911135. PMID: 36232445; PMCID: PMC9570262.	10.3390/ijms231911135	nan

Poicillopora

Poicillopora acuta

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Poicillopora meandrina

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Porites

Porites asteroides

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Kenkel CD, Meyer E, Matz MV. Gene expression under chronic heat stress in populations of the mustard hill coral (Porites astreoides) from different thermal environments. Mol Ecol. 2013 Aug;22(16):4322-4334. doi: 10.1111/mec.12390. Epub 2013 Jul 30. PMID: 23899402.	10.1111/mec.12390	nan

Porites australiensis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Takeuchi T, Yoshioka Y, Tada I, Kanda M, Broussard C, Iguchi A, Kusakabe M, Marin F, Satoh N, Inoue M. Whole-Genome Sequencing Highlights Conservative Genomic Strategies of a Stress-Tolerant, Long-Lived Scleractinian Coral, Porites australiensis Vaughan, 1918. Genome Biol Evol. 2021 Dec 1;13(12):evab270. doi: 10.1093/gbe/evab270. PMID: 34878117; PMCID: PMC8691061.	10.1093/gbe/evab270	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Shinzato C, Takeuchi T, Yoshioka Y, Tada I, Kanda M, Broussard C, Iguchi A, Kusakabe M, Marin F, Satoh N, Inoue M. Whole-Genome Sequencing Highlights Conservative Genomic Strategies of a Stress-Tolerant, Long-Lived Scleractinian Coral, Porites australiensis Vaughan, 1918. Genome Biol Evol. 2021 Dec 1;13(12):evab270. doi: 10.1093/gbe/evab270. PMID: 34878117; PMCID: PMC8691061.	10.1093/gbe/evab270	nan

Porites compressa

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Stephens, Timothy G , JunMo Lee, YuJin Jeong, Hwan Su Yoon, Hollie M Putnam, Eva Majerová, Debashish Bhattacharya, High-quality genome assembles from key Hawaiian coral species, GigaScience, Volume 11, 2022, giac098, https://doi.org/10.1093/gigascience/giac098	10.1093/gigascience/giac098	nan

Proites

Proites asteroides

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Kenkel CD, Meyer E, Matz MV. Gene expression under chronic heat stress in populations of the mustard hill coral (Porites astreoides) from different thermal environments. Mol Ecol. 2013 Aug;22(16):4322-4334. doi: 10.1111/mec.12390. Epub 2013 Jul 30. PMID: 23899402.	10.1111/mec.12390	nan

Scolanthus

Scolanthus callimorphus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Seriatopora

Seriatopora hystrix

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Kitchen SA, Crowder CM, Poole AZ, Weis VM, Meyer E. De Novo Assembly and Characterization of Four Anthozoan (Phylum Cnidaria) Transcriptomes. G3 (Bethesda). 2015 Sep 17;5(11):2441-52. doi: 10.1534/g3.115.020164. PMID: 26384772; PMCID: PMC4632063.	10.1534/g3.115.020164	nan

Stichodactyla

Stichodactyla helianthus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Stichodactyla mertensii

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Umimayanthus

Umimayanthus chanpuru

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Umimayanthus kanabou

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Zoanthus

Zoanthus gigantus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Zoanthus sanctaehelenae

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Zoanthus sociatus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Zoanthus solanderi

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Exaiptasia

Exaiptasia pallida

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Antipathes

Antipathes griggi

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Octocorallia

Phenganax

Phenganax marumi

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Phenganax stokvisi

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Phenganax subtilis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Plexaura

Plexaura homomalla

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Pelosi, J.A., Bernal, M.A., Krabbenhoft, T.J. et al. Fine-scale morphological, genomic, reproductive, and symbiont differences delimit the Caribbean octocorals Plexaura homomalla and P. kükenthali. Coral Reefs 41, 635–653 (2022). https://doi.org/10.1007/s00338-021-02175-x	10.1007/s00338-021-02175-x	nan

Plexaura kükenthali

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Pelosi, J.A., Bernal, M.A., Krabbenhoft, T.J. et al. Fine-scale morphological, genomic, reproductive, and symbiont differences delimit the Caribbean octocorals Plexaura homomalla and P. kükenthali. Coral Reefs 41, 635–653 (2022). https://doi.org/10.1007/s00338-021-02175-x	10.1007/s00338-021-02175-x	nan

Renilla

Renilla reniformis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Kayal E, Bentlage B, Pankey MS, Ohdera AH, Medina M, Plachetzki DC, Collins AG, Ryan JF. Phylogenomics provides a robust topology of the major cnidarian lineages and insights on the origins of key organismal traits. BMC Evolutionary Biology. 2018 Dec;18(1):68.	10.1186/s12862-018-1142-0	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Kayal E, Bentlage B, Pankey MS, Ohdera AH, Medina M, Plachetzki DC, Collins AG, Ryan JF. Phylogenomics provides a robust topology of the major cnidarian lineages and insights on the origins of key organismal traits. BMC Evolutionary Biology. 2018 Dec;18(1):68.	10.1186/s12862-018-1142-0	nan

Xenia

Xenia spec.

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Hu, M., Zheng, X., Fan, CM. et al. Lineage dynamics of the endosymbiotic cell type in the soft coral Xenia. Nature 582, 534–538 (2020). https://doi.org/10.1038/s41586-020-2385-7	10.1038/s41586-020-2385-7	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Hu, M., Zheng, X., Fan, CM. et al. Lineage dynamics of the endosymbiotic cell type in the soft coral Xenia. Nature 582, 534–538 (2020). https://doi.org/10.1038/s41586-020-2385-7	10.1038/s41586-020-2385-7	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Hu, M., Zheng, X., Fan, CM. et al. Lineage dynamics of the endosymbiotic cell type in the soft coral Xenia. Nature 582, 534–538 (2020). https://doi.org/10.1038/s41586-020-2385-7	10.1038/s41586-020-2385-7	nan

Single Cell Atlas

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Hu, M., Zheng, X., Fan, CM. et al. Lineage dynamics of the endosymbiotic cell type in the soft coral Xenia. Nature 582, 534–538 (2020). https://doi.org/10.1038/s41586-020-2385-7	10.1038/s41586-020-2385-7	nan

Anthomastus

Anthomastus spec.

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Calibelemnon

Calibelemnon francei

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Keratoisidnae

Keratoisidnae spec.

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Nephthyigorgia

Nephthyigorgia spec.

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Scleronephthya

Scleronephthya spec.

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Ceriantharia

Cerianthid

Cerianthid spec.

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Medusozoa

Cubozoa

Alatina

Alatina alata

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Ohdera A, Ames CL, Dikow RB, Kayal E, Chiodin M, Busby B, La S, Pirro S, Collins AG, Medina M, Ryan JF. Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa). Gigascience. 2019 Jul 1;8(7):giz069. doi: 10.1093/gigascience/giz069. PMID: 31257419; PMCID: PMC6599738.	10.1093/gigascience/giz069	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Ohdera A, Ames CL, Dikow RB, Kayal E, Chiodin M, Busby B, La S, Pirro S, Collins AG, Medina M, Ryan JF. Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa). Gigascience. 2019 Jul 1;8(7):giz069. doi: 10.1093/gigascience/giz069. PMID: 31257419; PMCID: PMC6599738.	10.1093/gigascience/giz069	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Chironex

Chironex yamaguchii

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Morbakka

Morbakka virulenta

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Khalturin, K., Shinzato, C., Khalturina, M. et al. Medusozoan genomes inform the evolution of the jellyfish body plan. Nat Ecol Evol 3, 811–822 (2019). https://doi.org/10.1038/s41559-019-0853-y	10.1038/s41559-019-0853-y	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Khalturin, K., Shinzato, C., Khalturina, M. et al. Medusozoan genomes inform the evolution of the jellyfish body plan. Nat Ecol Evol 3, 811–822 (2019). https://doi.org/10.1038/s41559-019-0853-y	10.1038/s41559-019-0853-y	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Khalturin, K., Shinzato, C., Khalturina, M. et al. Medusozoan genomes inform the evolution of the jellyfish body plan. Nat Ecol Evol 3, 811–822 (2019). https://doi.org/10.1038/s41559-019-0853-y	10.1038/s41559-019-0853-y	nan

Scyphozoa

Aurelia

Aurelia aurita

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Gold, D.A., Katsuki, T., Li, Y. et al. The genome of the jellyfish Aurelia and the evolution of animal complexity. Nat Ecol Evol 3, 96–104 (2019). https://doi.org/10.1038/s41559-018-0719-8	10.1038/s41559-018-0719-8	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Gold, D.A., Katsuki, T., Li, Y. et al. The genome of the jellyfish Aurelia and the evolution of animal complexity. Nat Ecol Evol 3, 96–104 (2019). https://doi.org/10.1038/s41559-018-0719-8	10.1038/s41559-018-0719-8	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Gold, D.A., Katsuki, T., Li, Y. et al. The genome of the jellyfish Aurelia and the evolution of animal complexity. Nat Ecol Evol 3, 96–104 (2019). https://doi.org/10.1038/s41559-018-0719-8	10.1038/s41559-018-0719-8	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Aurelia aurita(Atlantic Ocean)

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Khalturin, K., Shinzato, C., Khalturina, M., Hamada, M., Fujie, M., Koyanagi, R., Kanda, M., Goto, H., Anton-Erxleben, F., Toyokawa, M., Toshino, S., Satoh, N. Medusozoan genomes inform the evolution of the jellyfish body plan Nature Ecology & Evolution	10.1038/s41559-019-0853-y	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Khalturin, K., Shinzato, C., Khalturina, M., Hamada, M., Fujie, M., Koyanagi, R., Kanda, M., Goto, H., Anton-Erxleben, F., Toyokawa, M., Toshino, S., Satoh, N. Medusozoan genomes inform the evolution of the jellyfish body plan Nature Ecology & Evolution	10.1038/s41559-019-0853-y	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Khalturin, K., Shinzato, C., Khalturina, M., Hamada, M., Fujie, M., Koyanagi, R., Kanda, M., Goto, H., Anton-Erxleben, F., Toyokawa, M., Toshino, S., Satoh, N. Medusozoan genomes inform the evolution of the jellyfish body plan Nature Ecology & Evolution	10.1038/s41559-019-0853-y	nan

Aurelia aurita(Roscoff)

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Khalturin, K., Shinzato, C., Khalturina, M., Hamada, M., Fujie, M., Koyanagi, R., Kanda, M., Goto, H., Anton-Erxleben, F., Toyokawa, M., Toshino, S., Satoh, N. Medusozoan genomes inform the evolution of the jellyfish body plan Nature Ecology & Evolution	10.1038/s41559-019-0853-y	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Khalturin, K., Shinzato, C., Khalturina, M., Hamada, M., Fujie, M., Koyanagi, R., Kanda, M., Goto, H., Anton-Erxleben, F., Toyokawa, M., Toshino, S., Satoh, N. Medusozoan genomes inform the evolution of the jellyfish body plan Nature Ecology & Evolution	10.1038/s41559-019-0853-y	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Khalturin, K., Shinzato, C., Khalturina, M., Hamada, M., Fujie, M., Koyanagi, R., Kanda, M., Goto, H., Anton-Erxleben, F., Toyokawa, M., Toshino, S., Satoh, N. Medusozoan genomes inform the evolution of the jellyfish body plan Nature Ecology & Evolution	10.1038/s41559-019-0853-y	nan

Aurelia coerulea

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Cassiopea

Cassiopea xamachana

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Ohdera A, Ames CL, Dikow RB, Kayal E, Chiodin M, Busby B, La S, Pirro S, Collins AG, Medina M, Ryan JF. Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa). Gigascience. 2019 Jul 1;8(7):giz069. doi: 10.1093/gigascience/giz069. PMID: 31257419; PMCID: PMC6599738.	10.1093/gigascience/giz069	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Ohdera A, Ames CL, Dikow RB, Kayal E, Chiodin M, Busby B, La S, Pirro S, Collins AG, Medina M, Ryan JF. Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa). Gigascience. 2019 Jul 1;8(7):giz069. doi: 10.1093/gigascience/giz069. PMID: 31257419; PMCID: PMC6599738.	10.1093/gigascience/giz069	nan

Chrysaora

Chrysaora achlyos

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Chrysaora chesapeakei

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Chrysaora fuscescens

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Nemopilema

Nemopilema nomurai

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Kim HM, Weber JA, Lee N, Park SG, Cho YS, Bhak Y, Lee N, Jeon Y, Jeon S, Luria V, Karger A, Kirschner MW, Jo YJ, Woo S, Shin K, Chung O, Ryu JC, Yim HS, Lee JH, Edwards JS, Manica A, Bhak J, Yum S. The genome of the giant Nomura's jellyfish sheds light on the early evolution of active predation. BMC Biol. 2019 Mar 29;17(1):28. doi: 10.1186/s12915-019-0643-7 PMID: 30925871; PMCID: PMC6441219.	10.1186/s12915-019-0643-7	nan

Rhopilema

Rhopilema esculentum

SRA Library

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Li Y, Gao L, Pan Y, Tian M, Li Y, He C, Dong Y, Sun Y, Zhou Z. Chromosome-level reference genome of the jellyfish Rhopilema esculentum. Gigascience. 2020 Apr 1;9(4):giaa036. doi: 10.1093/gigascience/giaa036; PMCID: PMC7172023.	10.1093/gigascience/giaa036	nan
Link to Dataset	nan	Li Y, Gao L, Pan Y, Tian M, Li Y, He C, Dong Y, Sun Y, Zhou Z. Chromosome-level reference genome of the jellyfish Rhopilema esculentum. Gigascience. 2020 Apr 1;9(4):giaa036. doi: 10.1093/gigascience/giaa036; PMCID: PMC7172023.	10.1093/gigascience/giaa036	nan

Atolla

Atolla vanhoeffeni

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Hydrozoa

Bythotiara

Bythotiara depressa

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Cladonema

Cladonema radiatum

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Clytia

Clytia hemispaerica

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Transcripts

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Single Cell Atlas

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Chari, Tara; Weissbourd, Brandon; Gehring, Jase; Ferraioli, Anna; Leclère, Lucas; Herl, Makenna et al. (2021): Whole-animal multiplexed single-cell RNA-seq reveals transcriptional shifts across Clytia medusa cell types. In Science advances 7 (48), eabh1683. DOI: 10.1126/sciadv.abh1683.	10.1126/sciadv.abh1683	nan

Craspedacusta

Craspedacusta sowerbii

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Craspedacusta spec.

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Hydra

Hydra viridissima

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Hydra vulgaris

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH, Shu S, Blumberg B, Dana CE, Gee L, Kibler DF, Law L, Lindgens D, Martinez DE, Peng J, Wigge PA, Bertulat B, Guder C, Nakamura Y, Ozbek S, Watanabe H, Khalturin K, Hemmrich G, Franke A, Augustin R, Fraune S, Hayakawa E, Hayakawa S, Hirose M, Hwang JS, Ikeo K, Nishimiya-Fujisawa C, Ogura A, Takahashi T, Steinmetz PR, Zhang X, Aufschnaiter R, Eder MK, Gorny AK, Salvenmoser W, Heimberg AM, Wheeler BM, Peterson KJ, Böttger A, Tischler P, Wolf A, Gojobori T, Remington KA, Strausberg RL, Venter JC, Technau U, Hobmayer B, Bosch TC, Holstein TW, Fujisawa T, Bode HR, David CN, Rokhsar DS, Steele RE. The dynamic genome of Hydra. Nature. 2010 Mar 25;464(7288):592-6. doi: 10.1038/nature08830. Epub 2010 Mar 14. PMID: 20228792; PMCID: PMC4479502.	10.1038/nature08830	nan

Mitochondrial Chromosome

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Voigt O, Erpenbeck D, Wörheide G. A fragmented metazoan organellar genome: the two Mitochondrialchondrial chromosomes of Hydra magnipapillata. BMC Genomics. 2008 Jul 26;9:350. doi: 10.1186/1471-2164-9-350. PMID: 18655725; PMCID: PMC2518934.	10.1186/1471-2164-9-350	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH, Shu S, Blumberg B, Dana CE, Gee L, Kibler DF, Law L, Lindgens D, Martinez DE, Peng J, Wigge PA, Bertulat B, Guder C, Nakamura Y, Ozbek S, Watanabe H, Khalturin K, Hemmrich G, Franke A, Augustin R, Fraune S, Hayakawa E, Hayakawa S, Hirose M, Hwang JS, Ikeo K, Nishimiya-Fujisawa C, Ogura A, Takahashi T, Steinmetz PR, Zhang X, Aufschnaiter R, Eder MK, Gorny AK, Salvenmoser W, Heimberg AM, Wheeler BM, Peterson KJ, Böttger A, Tischler P, Wolf A, Gojobori T, Remington KA, Strausberg RL, Venter JC, Technau U, Hobmayer B, Bosch TC, Holstein TW, Fujisawa T, Bode HR, David CN, Rokhsar DS, Steele RE. The dynamic genome of Hydra. Nature. 2010 Mar 25;464(7288):592-6. doi: 10.1038/nature08830. Epub 2010 Mar 14. PMID: 20228792; PMCID: PMC4479502.	10.1038/nature08830	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH, Shu S, Blumberg B, Dana CE, Gee L, Kibler DF, Law L, Lindgens D, Martinez DE, Peng J, Wigge PA, Bertulat B, Guder C, Nakamura Y, Ozbek S, Watanabe H, Khalturin K, Hemmrich G, Franke A, Augustin R, Fraune S, Hayakawa E, Hayakawa S, Hirose M, Hwang JS, Ikeo K, Nishimiya-Fujisawa C, Ogura A, Takahashi T, Steinmetz PR, Zhang X, Aufschnaiter R, Eder MK, Gorny AK, Salvenmoser W, Heimberg AM, Wheeler BM, Peterson KJ, Böttger A, Tischler P, Wolf A, Gojobori T, Remington KA, Strausberg RL, Venter JC, Technau U, Hobmayer B, Bosch TC, Holstein TW, Fujisawa T, Bode HR, David CN, Rokhsar DS, Steele RE. The dynamic genome of Hydra. Nature. 2010 Mar 25;464(7288):592-6. doi: 10.1038/nature08830. Epub 2010 Mar 14. PMID: 20228792; PMCID: PMC4479502.	10.1038/nature08830	nan

Single Cell Atlas

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Siebert, Stefan; Farrell, Jeffrey A.; Cazet, Jack F.; Abeykoon, Yashodara; Primack, Abby S.; Schnitzler, Christine E.; Juliano, Celina E. (2019): Stem cell differentiation trajectories in Hydra resolved at single-cell resolution. In Science 365 (6451), eaav9314. DOI: 10.1126/science.aav9314.	10.1126/science.aav9314	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Juliano CE, Reich A, Liu N, Götzfried J, Zhong M, Uman S, Reenan RA, Wessel GM, Steele RE, Lin H. PIWI proteins and PIWI-interacting RNAs function in Hydra somatic stem cells. Proc Natl Acad Sci U S A. 2014 Jan 7;111(1):337-42. doi: 10.1073/pnas.1320965111. Epub 2013 Dec 23. PMID: 24367095; PMCID: PMC3890812.	10.1073/pnas.1320965111	nan
Link to Dataset	nan	Petersen HO, Höger SK, Looso M, Lengfeld T, Kuhn A, Warnken U, Nishimiya-Fujisawa C, Schnölzer M, Krüger M, Özbek S, Simakov O, Holstein TW. A Comprehensive Transcriptomic and Proteomic Analysis of Hydra Head Regeneration. Mol Biol Evol. 2015 Aug;32(8):1928-47. doi: 10.1093/molbev/msv079. Epub 2015 Apr 3. PMID: 25841488; PMCID: PMC4833066.	10.1073/pnas.1320965111	nan
Link to Dataset	nan	nan	nan	nan

Hydractinia

Hydractinia echinata

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Mitochondrial Chromosome

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan
Link to Dataset	nan	nan	nan	nan

Predicted miRNA

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Hydractinia symbiolongicarpus

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Mitochondrial Chromosome

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan
Link to Dataset	nan	nan	nan	nan

Predicted miRNA

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Single Cell Atlas

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Abylopsis

Abylopsis tetragona

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Aegina

Aegina citrea

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Agalma

Agalma elegans

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Candelabrum

Candelabrum spec.

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Craseoa

Craseoa lathetica

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Ectopleura

Ectopleura larynx

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Halitrephes

Halitrephes valdiviae

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Nanomia

Nanomia bijuga

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Obelia

Obelia longissima

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Physalia

Physalia physalis

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Podocoryna

Podocoryna carnea

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Staurozoa

Calvadosia

Calvadosia cruxmelitensis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Ohdera A, Ames CL, Dikow RB, Kayal E, Chiodin M, Busby B, La S, Pirro S, Collins AG, Medina M, Ryan JF. Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa). Gigascience. 2019 Jul 1;8(7):giz069. doi: 10.1093/gigascience/giz069. PMID: 31257419; PMCID: PMC6599738.	10.1093/gigascience/giz069	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Ohdera A, Ames CL, Dikow RB, Kayal E, Chiodin M, Busby B, La S, Pirro S, Collins AG, Medina M, Ryan JF. Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa). Gigascience. 2019 Jul 1;8(7):giz069. doi: 10.1093/gigascience/giz069. PMID: 31257419; PMCID: PMC6599738.	10.1093/gigascience/giz069	nan

Haliclystus

Haliclystus inabai

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Haliclystus sanjuanensis

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Zapata, Felipe; Goetz, Freya E.; Smith, Stephen A.; Howison, Mark; Siebert, Stefan; Church, Samuel H. et al. (2016): Data from: Phylogenomic analyses support traditional relationships within Cnidaria.	nan	nan

Endocnidozoa

Myxozoa

Henneguya

Henneguya salminicola

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Yahalomi, Dayana; Atkinson, Stephen D.; Neuhof, Moran; Huchon, Dorothée (2020): A cnidarian parasite of salmon (Myxozoa: Henneguya) lacks a Mitochondrialchondrial genome. In PNAS 117 (10), pp. 5358–5363. DOI: 10.1073/pnas.1909907117.	10.1073/pnas.1909907117	nan
Link to Dataset	nan	nan	10.1073/pnas.1909907117	nan

Myxobolus

Myxobolus honghuensis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Guo, Q., Atkinson, S.D., Xiao, B. et al. A myxozoan genome reveals mosaic evolution in a parasitic cnidarian. BMC Biol 20, 51 (2022). https://doi.org/10.1186/s12915-022-01249-8	10.1186/s12915-022-01249-8	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Guo, Q., Atkinson, S.D., Xiao, B. et al. A myxozoan genome reveals mosaic evolution in a parasitic cnidarian. BMC Biol 20, 51 (2022). https://doi.org/10.1186/s12915-022-01249-8	10.1186/s12915-022-01249-8	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Guo, Q., Atkinson, S.D., Xiao, B. et al. A myxozoan genome reveals mosaic evolution in a parasitic cnidarian. BMC Biol 20, 51 (2022). https://doi.org/10.1186/s12915-022-01249-8	10.1186/s12915-022-01249-8	nan

Myxobolus squamalis

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Yahalomi, Dayana; Atkinson, Stephen D.; Neuhof, Moran; Huchon, Dorothée (2020): A cnidarian parasite of salmon (Myxozoa: Henneguya) lacks a Mitochondrialchondrial genome. In PNAS 117 (10), pp. 5358–5363. DOI: 10.1073/pnas.1909907117.	10.1073/pnas.1909907117	nan

Ctenophora

Tentaculata

Lobata

Mnemiopsis

Mnemiopsis leidyi

Genome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Mitochondrial Chromosome

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Single Cell Atlas

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	Sebé-Pedrós A, Chomsky E, Pang K, Lara-Astiaso D, Gaiti F, Mukamel Z, Amit I, Hejnol A, Degnan BM, Tanay A. Early metazoan cell type diversity and the evolution of multicellular gene regulation. Nat Ecol Evol. 2018 Jul;2(7):1176-1188. doi: 10.1038/s41559-018-0575-6. Epub 2018 Jun 25. PMID: 29942020; PMCID: PMC6040636.	10.1038/s41559-018-0575-6	nan

Transcriptome Assembly

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Cydippida

Pleurobrachia

Pleurobrachia bachei

Predicted Genes

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

Predicted Proteins

Dataset Link	Dataset DOI	Publication	Publication DOI	Additional Information
Link to Dataset	nan	nan	nan	nan

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Cnidaria

Anthozoa

Hexacorallia

Acropora

Anthopleura

Antipathozoanthus

Astreopora

Bergia

Churabana

Entacmaea

Epizoanthus

Fungia

Heteractis

Hydrozoanthus

Isaurus

Montastraea

Montipora

Nematostella

Neozoanthus

Orbicella

Palythoa

Parazoanthus

Phymanthus

Pocillopora

Poicillopora

Porites

Proites

Scolanthus

Seriatopora

Stichodactyla

Umimayanthus

Zoanthus

Exaiptasia

Antipathes

Octocorallia

Phenganax

Plexaura

Renilla

Xenia

Anthomastus

Calibelemnon

Keratoisidnae

Nephthyigorgia

Scleronephthya

Ceriantharia

Cerianthid

Medusozoa

Cubozoa

Alatina

Chironex

Morbakka

Scyphozoa

Aurelia

Cassiopea

Chrysaora

Nemopilema

Rhopilema

Atolla

Hydrozoa

Bythotiara

Cladonema

Clytia

Craspedacusta

Hydra

Hydractinia

Abylopsis

Aegina

Agalma

Candelabrum

Craseoa

Ectopleura

Halitrephes

Nanomia

Obelia

Physalia

Podocoryna

Staurozoa

Calvadosia

Haliclystus